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DNA Surveillance

Species identification with DNA
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General details for dataset 'Myst Ctrl Vs3.1'

Loci: mtDNA control Region (=D-Loop)
Domain: Mysticetes Vs3.1
Alignment: 37 sequences, 385 sites
Alignment scoring
-ACGT
A1.0-2.0-1.0-2.0
C-2.01.0-2.0-1.0
G-1.0-2.01.0-2.0
T-2.0-1.0-2.01.0
Create/extend = -3.0/-1.7
Substitution model
-ACGT
A-1.02.01.0
C1.0-1.02.0
G2.01.0-1
T1.02.01-
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

IDNameGroup
BborNZ1.SB Sei WhaleBalaenoptera borealis
BborNA5.UA Sei WhaleBalaenoptera borealis
BborWNA.SB Sei WhaleBalaenoptera borealis
BedeJP1.HY Bryde's Whale (Kochi form)Balaenoptera edeni (Kochi form)
BedeSA6.UA Bryde's Whale (Common form)Balaenoptera edeni (Common form)
BedeNP8.HY Bryde's Whake (Common form)Balaenoptera edeni (Common form)
BedeI10.HY Bryde's Whale (Common form)Balaenoptera edeni (Common form)
BedeS12.HY Bryde's Whale (Solomon Is. form)Balaenoptera edeni (Solomon Is.)
BphyIC5.UA Fin WhaleBalaenoptera physalus
BphyMD.CB Fin WhaleBalaenoptera physalus
MnovSEA9 Humpback WhaleMegaptrea novaeangliae
MnovIC8.UA Humpback WhaleMegaptrea novaeangliae
BmusMX.SB Blue WhaleBalaenoptera musculus
BmusIC4.UA Blue WhaleBalaenoptera musculus
BmubNZ2.SB Blue Whale (pygmy?)Balaenoptera musculus
ErobWA397 Gray WhaleEschrichtius robustus
ErobNP0.UA Gray WhaleEschrichtius robustus
ErobWS03 Gray WhaleEschrichtius robustus
BacuNPSWFC North Pacific Minke WhaleBalaenoptera acutorostrata scammoni
BacuNA6.UA North Atlantic Minke WhaleBalaenoptera acutorostrata acutorostrata
BacuNA3.IB North Atlantic Minke WhaleBalaenoptera acutorostrata acutorostrata
BacNZ03dw Dwarf Minke WhaleBalaenoptera acuturostrata subsp. (dwarf)
BbonQL.SB Antartic Minke WhaleBalaenoptera bonaerensis
BbonSO8.RH Antartic Minke WhaleBalaenoptera bonaerensis
EjapNP1.HR North Pacific Right WhaleEubalaena japonica
EjapNP2.HR North Pacific Right WhaleEubalaena japonica
EausSO8.HR Southern Right WhaleEubalaena australis
EausSP16NP Southern Right WhaleEubalaena australis
EglaNA9.SM North Atlantic Right WhaleEubalaena glacialis
EglaNA3.SM North Atlantic Right WhaleEubalaena glacialis
BmysNP7.UA BowheadBalaena mysticetus
BmysNEPSB1 BowheadBalaena mysticetus
BmysNEPSB2 BowheadBalaena mysticetus
CmarSA8.UA Pygmy Right WhaleCapera marginata
CmarNZ1.SB Pygmy Right WhaleCapera marginata
PmaIC3.UA Sperm WhalePhyster macrocephalus
PmacEP4.DW Sperm WhalePhyster macrocephalus