title logo

DNA Surveillance

Species identification with DNA
Witness for Whales Home About How to Use The Science Links and Publications Data Ownership
Search Cluster (Simple) Cluster (Advanced) Maximum Likelihood Example Data

General details for dataset 'Lisso CytB Vs3.1'

Loci: Cytochrome B
Domain: Lissodelphininae Vs3.1
Alignment: 22 sequences, 405 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -3.0/-1.0
Substitution model
-ACGT
A-1.02.01.0
C1.0-1.02.0
G2.01.0-1
T1.02.01-
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

IDNameGroup
Ccom3.LD Commerson's DolphinCephalorhynchus commersonii
Ceut2.LD Chilean DolphinCephalorhynchus eutropia
Ceut8.MM Chilean DolphinCephalorhynchus eutropia
CheaO.LD Heaviside's DolphinCephalorhynchus heavisidii
Chec1.LD Hector's DolphinCephalorhynchus hectori
Lacu5.LD Atlantic White-Sided DolphinLagenorhynchus acutus
Lacu0.FC Atlantic White-Sided DolphinLagenorhynchus acutus
Lalb4.LD White-Beaked DolphinLagenorhynchus albirostris
Lalb7.FC White-Beaked DolphinLagenorhynchus albirostris
Lalb0.UA White-Beaked DolphinLagenorhynchus albirostris
Laus9.LD Peale's DolphinLagenorhynchus australis
Lcru8.LD Hourglass DolphinLagenorhynchus cruciger
Lobl7.LD Pacific White-Sided DolphinLagenorhynchus obliquidens
Lobl4.FC Pacific White-Sided DolphinLagenorhynchus obliquidens
Lobl5.FC Pacific White-Sided DolphinLagenorhynchus obliquidens
Lobs6.LD Dusky DolphinLagenorhynchus obscurus
Lobs2.FC Dusky DolphinLagenorhynchus obscurus
Lobs3.FC Dusky DolphinLagenorhynchus obscurus
Lbor4.LD Northern Right Whale DolphinLissodelphis borealis
Lper5.LD Southern Right Whale DolphinLissodelphis peronii
Lper8.MM Southern Right Whale DolphinLissodelphis peronii
Pcra7.LD False Killer WhalePseudorca crassidens