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DNA Surveillance

Species identification with DNA
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Search Cluster (Simple) Cluster (Advanced) Maximum Likelihood Example Data

General details for dataset 'Delph Sten CytB Vs4.3'

Loci: Cytochrome B
Domain: Delphinidae + Stenoninae Vs4.3
Alignment: 54 sequences, 405 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -3.0/-1.0
Substitution model
-ACGT
A-1.02.01.0
C1.0-1.02.0
G2.01.0-1
T1.02.01-
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

IDNameGroup
Ceut2.LD ChileanDelphinus capensis
Dcap6.LD common (long-beaked)Delphinus capensis
Dcap7.LD common (long-beaked)Delphinus capensis
DdelCa5.PR common (short-beaked)Delphinus capensis
DdelEP6.PR common (short-beaked)Delphinus capensis
DdelP5.LD common (short-beaked)Delphinus capensis
DdelVEN327 common (short-beaked)Delphinus capensis
DdelVEN343 common (short-beaked)Delphinus capensis
Dtro8.LD Delphinus delphis (tropicalis)Delphinus capensis
Laus9.LD Peale'sDelphinus capensis
Lhos615 Fraser'sLagenodelphis hosei
Lhos842 Fraser'sLagenodelphis hosei
LhosA9.LD Fraser'sLagenodelphis hosei
LhosCI01 Fraser'sLagenodelphis hosei
LhosP8.LD Fraser'sLagenodelphis hosei
LhosZ2507 Fraser'sLagenodelphis hosei
Satt4.DI Pantropical spottedStenella attenuata
SattA6.LD Pantropical spottedStenella attenuata
SattP7.LD Pantropical spottedStenella attenuata
SbreA7.LD rough-toothedSteno bredanensis
SbreFP15 rough-toothedSteno bredanensis
SbreFP16 rough-toothedSteno bredanensis
SbreP6.LD rough-toothedSteno bredanensis
SchiSF0.LD Indo-pacific humpbackedSousa chinensis
SchiWP9.LD Indo-pacific humpbackedSousa chinensis
SchiZ7886 Indo-pacific humpbackedSousa chinensis
SchiZ7887 Indo-pacific humpbackedSousa chinensis
SchiZ7890 Indo-pacific humpbackedSousa chinensis
SchiZ7893 Indo-pacific humpbackedSousa chinensis
SchiZ8927 Indo-pacific humpbackedSousa chinensis
Scly3.LD ClymeneStenella clymene
SclyZ4530 ClymeneStenella clymene
ScoeCO01 stripedStenella coeruleoalba
ScoeM2.LD stripedStenella coeruleoalba
ScoeNZ01 stripedStenella coeruleoalba
ScoeP1.LD stripedStenella coeruleoalba
Sflu8.LD tucuxiSotalia fluviatalis
SfluSA7.IC tucuxiSotalia fluviatalis
Sfro01022801 Atlantic spottedStenella frontalis
Sfro877 Atlantic spottedStenella frontalis
SfroA0.LD Atlantic spottedStenella frontalis
SfroA9.LD Atlantic spottedStenella frontalis
SfroGU01030102 Atlantic spottedStenella frontalis
SfroVI366 Atlantic spottedStenella frontalis
Slon2.DI spinnerStenella longirostris
SlonA0.LD spinnerStenella longirostris
SlonCI01 Fraser'sLagenodelphis hosei
SlonSE2.LD spinnerStenella longirostris
TaduSE1.LD bottlenose (aduncus)Tursiops aduncus
TaduSF2.LD bottlenose (aduncus)Tursiops aduncus
Ttru6.UA bottlenose (truncatus)Tursiops truncatus
TtruA3.LD bottlenose (truncatus)Tursiops truncatus
TtruCCSwani bottlenose (truncatus)Tursiops truncatus
TtruNZ17 bottlenose (truncatus)Tursiops truncatus