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DNA Surveillance

Species identification with DNA
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General details for dataset 'BPs1 CytB'

Loci: Cytochrome B
Domain: Brazilian Psittacidae v1.0 (non curated)
Alignment: 229 sequences, 1141 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -2.9/-0.7
Substitution model
-ACGT
A-1.01.01.0
C1.0-1.01.0
G1.01.0-1
T1.01.01-
(A,G,C,T) = (0.25, 0.25, 0.25, 0.25)

Sequence details

IDNameGroupGenBank
31074340 Amazona aestivaAmazona 31074340
3169219 Amazona aestivaAmazona 3169219
56277923 Amazona xanthopsAmazona 56277923
56277837 Amazona xanthopsAmazona 56277837
31074344 Anodorhynchus hyacinthinusAnodorhynchus 31074344
3169227 Anodorhynchus hyacinthinusAnodorhynchus 3169227
33305103 Anodorhynchus leariAnodorhynchus 33305103
56277845 Anodorhynchus leariAnodorhynchus 56277845
33305101 Anodorhynchus leariAnodorhynchus 33305101
31074342 Ara araraunaAra 31074342
76096723 Ara araraunaAra 76096723
3169221 Ara araraunaAra 3169221
56277831 Ara chloropterusAra 56277831
56277833 Ara glaucogularisAra 56277833
56277835 Ara macaoAra 56277835
33305107 Ara severaAra 33305107
33305105 Ara severaAra 33305105
76096721 Aratinga aureaAratinga 76096721
3169223 Aratinga aureaAratinga 3169223
31074350 Aratinga aureaAratinga 31074350
37784329 Aratinga auricapillaAratinga 37784329
37784317 Aratinga auricapillaAratinga 37784317
37784319 Aratinga auricapillaAratinga 37784319
37784321 Aratinga auricapillaAratinga 37784321
37784323 Aratinga auricapillaAratinga 37784323
37784325 Aratinga auricapillaAratinga 37784325
37784327 Aratinga auricapillaAratinga 37784327
33305111 Aratinga cactorumAratinga 33305111
33355918 Aratinga cactorumAratinga 33355918
37784339 Aratinga jandayaAratinga 37784339
37784337 Aratinga jandayaAratinga 37784337
37784335 Aratinga jandayaAratinga 37784335
37784331 Aratinga jandayaAratinga 37784331
37784333 Aratinga jandayaAratinga 37784333
71648794 Aratinga leucophthalmusAratinga 71648794
33305109 Aratinga leucophthalmusAratinga 33305109
37784309 Aratinga solstitialisAratinga 37784309
37784315 Aratinga solstitialisAratinga 37784315
37784313 Aratinga solstitialisAratinga 37784313
37784311 Aratinga solstitialisAratinga 37784311
56277843 Aratinga weddelliAratinga 56277843
37784343 Aratinga weddelliiAratinga 37784343
37784341 Aratinga weddelliiAratinga 37784341
37784345 Aratinga weddelliiAratinga 37784345
37784347 Aratinga weddelliiAratinga 37784347
33305127 Brotogeris versicolurusBrotogeris 33305127
33305129 Brotogeris versicolurusBrotogeris 33305129
3169231 Cyanopsitta spixiiCyanopsitta 3169231
31074352 Cyanopsitta spixiiCyanopsitta 31074352
76096713 Cyanopsitta spixiiCyanopsitta 76096713
76096719 Deroptyus accipitrinusDeroptyus 76096719
31074354 Deroptyus accipitrinusDeroptyus 31074354
3169235 Deroptyus accipitrinusDeroptyus 3169235
33305113 Diopsittaca nobilisDiopsittaca 33305113
56277921 Graydidascalus brachyurusGraydidascalus 56277921
56277919 Graydidascalus brachyurusGraydidascalus 56277919
76096715 Guaruba guaroubaGuaruba 76096715
3169239 Guaruba guaroubaGuaruba 3169239
31074346 Guaruba guaroubaGuaruba 31074346
56277853 Gypopsitta aurantiocephalaGypopsitta 56277853
56277855 Gypopsitta aurantiocephalaGypopsitta 56277855
56277857 Gypopsitta aurantiocephalaGypopsitta 56277857
56277851 Gypopsitta aurantiocephalaGypopsitta 56277851
56277881 Gypopsitta barrabandiGypopsitta 56277881
56277883 Gypopsitta barrabandiGypopsitta 56277883
56277885 Gypopsitta barrabandiGypopsitta 56277885
56277889 Gypopsitta barrabandiGypopsitta 56277889
56277887 Gypopsitta barrabandiGypopsitta 56277887
56277875 Gypopsitta caicaGypopsitta 56277875
56277879 Gypopsitta caicaGypopsitta 56277879
56277869 Gypopsitta caicaGypopsitta 56277869
56277871 Gypopsitta caicaGypopsitta 56277871
56277873 Gypopsitta caicaGypopsitta 56277873
56277877 Gypopsitta caicaGypopsitta 56277877
56277901 Gypopsitta coccinicollarisGypopsitta 56277901
56277903 Gypopsitta coccinicollarisGypopsitta 56277903
56277899 Gypopsitta coccinicollarisGypopsitta 56277899
56277907 Gypopsitta haematotisGypopsitta 56277907
56277905 Gypopsitta haematotisGypopsitta 56277905
56277895 Gypopsitta pulchraGypopsitta 56277895
56277897 Gypopsitta pulchraGypopsitta 56277897
56277891 Gypopsitta pyriliaGypopsitta 56277891
56277893 Gypopsitta pyriliaGypopsitta 56277893
56277927 Hapalopsittaca amazoninaHapalopsittaca 56277927
76096727 Myiopsitta monachusMyiopsitta 76096727
33305131 Myiopsitta monachusMyiopsitta 33305131
33305133 Myiopsitta monachusMyiopsitta 33305133
71648796 Nandayus nendayNandayus 71648796
37788784 Nandayus nendayNandayus 37788784
33305115 Orthopsittaca manilataOrthopsittaca 33305115
33305117 Orthopsittaca manilataOrthopsittaca 33305117
76096717 Orthopsittaca manilataOrthopsittaca 76096717
56277913 Pionopsitta pileataPionopsitta 56277913
56277915 Pionopsitta pileataPionopsitta 56277915
56277911 Pionopsitta pileataPionopsitta 56277911
56277909 Pionopsitta pileataPionopsitta 56277909
56277917 Pionopsitta pileataPionopsitta 56277917
56277859 Pionopsitta vulturinaPionopsitta 56277859
56277867 Pionopsitta vulturinaPionopsitta 56277867
56277865 Pionopsitta vulturinaPionopsitta 56277865
56277863 Pionopsitta vulturinaPionopsitta 56277863
56277861 Pionopsitta vulturinaPionopsitta 56277861
154371594 Pionus chalcopterusPionus 154371594
154371590 Pionus cyanescensPionus 154371590
154371592 Pionus cyanescensPionus 154371592
154371624 Pionus fuscusPionus 154371624
154371622 Pionus fuscusPionus 154371622
56277849 Pionus fuscusPionus 56277849
154371596 Pionus maximilianiPionus 154371596
56277839 Pionus maximilianiPionus 56277839
154371604 Pionus maximiliani lacerusPionus 154371604
154371602 Pionus maximiliani lacerusPionus 154371602
154371606 Pionus maximiliani lacerusPionus 154371606
154371598 Pionus maximiliani melanoblepharusPionus 154371598
154371600 Pionus maximiliani siyPionus 154371600
154371562 Pionus menstruusPionus 154371562
3169247 Pionus menstruusPionus 3169247
31074348 Pionus menstruusPionus 31074348
154371556 Pionus menstruusPionus 154371556
154371558 Pionus menstruusPionus 154371558
154371560 Pionus menstruusPionus 154371560
56277847 Pionus menstruus menstruusPionus 56277847
154371578 Pionus menstruus reichenowiPionus 154371578
154371574 Pionus menstruus reichenowiPionus 154371574
154371572 Pionus menstruus reichenowiPionus 154371572
154371576 Pionus menstruus reichenowiPionus 154371576
154371564 Pionus menstruus rubrigularisPionus 154371564
154371570 Pionus menstruus rubrigularisPionus 154371570
154371566 Pionus menstruus rubrigularisPionus 154371566
154371568 Pionus menstruus rubrigularisPionus 154371568
154371588 Pionus senilisPionus 154371588
154371586 Pionus senilisPionus 154371586
154371618 Pionus sordidusPionus 154371618
154371614 Pionus sordidus anteliusPionus 154371614
154371616 Pionus sordidus anteliusPionus 154371616
154371608 Pionus sordidus corallinusPionus 154371608
154371610 Pionus sordidus mindoensisPionus 154371610
154371620 Pionus sordidus ponsiPionus 154371620
154371612 Pionus sordidus saturatusPionus 154371612
154371580 Pionus tumultuosusPionus 154371580
154371584 Pionus tumultuosus seniloidesPionus 154371584
154371582 Pionus tumultuosus seniloidesPionus 154371582
33305119 Primolius auricollisPrimolius 33305119
33305121 Primolius auricollisPrimolius 33305121
76096725 Primolius auricollisPrimolius 76096725
33305135 Primolius couloniPrimolius 33305135
33305123 Primolius maracanaPrimolius 33305123
33305125 Primolius maracanaPrimolius 33305125
60391137 Pyrrhura albipectusPyrrhura 60391137
60391139 Pyrrhura albipectusPyrrhura 60391139
60391087 Pyrrhura amazonumPyrrhura 60391087
60391089 Pyrrhura amazonumPyrrhura 60391089
60391091 Pyrrhura amazonumPyrrhura 60391091
60391173 Pyrrhura cruentataPyrrhura 60391173
60391175 Pyrrhura cruentataPyrrhura 60391175
60391055 Pyrrhura einsenmanniPyrrhura 60391055
60391057 Pyrrhura eisenmanniPyrrhura 60391057
60391105 Pyrrhura emmaPyrrhura 60391105
60391111 Pyrrhura emmaPyrrhura 60391111
60391103 Pyrrhura emmaPyrrhura 60391103
60391109 Pyrrhura emmaPyrrhura 60391109
60391107 Pyrrhura emmaPyrrhura 60391107
60391145 Pyrrhura frontalisPyrrhura 60391145
60391121 Pyrrhura griseipectusPyrrhura 60391121
60391113 Pyrrhura griseipectusPyrrhura 60391113
60391115 Pyrrhura griseipectusPyrrhura 60391115
60391117 Pyrrhura griseipectusPyrrhura 60391117
60391119 Pyrrhura griseipectusPyrrhura 60391119
60391167 Pyrrhura hoffmaniPyrrhura 60391167
60391165 Pyrrhura hoffmaniPyrrhura 60391165
60391147 Pyrrhura lepidaPyrrhura 60391147
60391149 Pyrrhura lepidaPyrrhura 60391149
60391123 Pyrrhura leucotisPyrrhura 60391123
60391127 Pyrrhura leucotisPyrrhura 60391127
60391125 Pyrrhura leucotisPyrrhura 60391125
60391159 Pyrrhura melanuraPyrrhura 60391159
60391161 Pyrrhura melanuraPyrrhura 60391161
60391163 Pyrrhura melanuraPyrrhura 60391163
60391155 Pyrrhura melanuraPyrrhura 60391155
60391157 Pyrrhura melanuraPyrrhura 60391157
60391141 Pyrrhura molinaePyrrhura 60391141
60391143 Pyrrhura molinaePyrrhura 60391143
60391129 Pyrrhura orcesiPyrrhura 60391129
60391131 Pyrrhura orcesiPyrrhura 60391131
60391151 Pyrrhura perlataPyrrhura 60391151
60391153 Pyrrhura perlataPyrrhura 60391153
60391023 Pyrrhura peruvianaPyrrhura 60391023
60391025 Pyrrhura peruvianaPyrrhura 60391025
60391097 Pyrrhura pfrimeriPyrrhura 60391097
60391099 Pyrrhura pfrimeriPyrrhura 60391099
60391101 Pyrrhura pfrimeriPyrrhura 60391101
60391095 Pyrrhura pfrimeriPyrrhura 60391095
60391093 Pyrrhura pfrimeriPyrrhura 60391093
60391069 Pyrrhura pictaPyrrhura 60391069
31074356 Pyrrhura pictaPyrrhura 31074356
3169251 Pyrrhura pictaPyrrhura 3169251
60391059 Pyrrhura pictaPyrrhura 60391059
60391061 Pyrrhura pictaPyrrhura 60391061
60391063 Pyrrhura pictaPyrrhura 60391063
60391067 Pyrrhura pictaPyrrhura 60391067
56277841 Pyrrhura pictaPyrrhura 56277841
60391065 Pyrrhura pictaPyrrhura 60391065
60391133 Pyrrhura rhodocephalaPyrrhura 60391133
60391135 Pyrrhura rhodocephalaPyrrhura 60391135
60391033 Pyrrhura roseifronsPyrrhura 60391033
60391051 Pyrrhura roseifronsPyrrhura 60391051
60391027 Pyrrhura roseifronsPyrrhura 60391027
60391029 Pyrrhura roseifronsPyrrhura 60391029
60391031 Pyrrhura roseifronsPyrrhura 60391031
60391035 Pyrrhura roseifronsPyrrhura 60391035
60391039 Pyrrhura roseifronsPyrrhura 60391039
60391041 Pyrrhura roseifronsPyrrhura 60391041
60391043 Pyrrhura roseifronsPyrrhura 60391043
60391037 Pyrrhura roseifronsPyrrhura 60391037
60391049 Pyrrhura roseifronsPyrrhura 60391049
60391053 Pyrrhura roseifronsPyrrhura 60391053
60391171 Pyrrhura rupicolaPyrrhura 60391171
60391169 Pyrrhura rupicolaPyrrhura 60391169
60391071 Pyrrhura snethlageaePyrrhura 60391071
60391073 Pyrrhura snethlageaePyrrhura 60391073
60391045 Pyrrhura snethlageaePyrrhura 60391045
60391075 Pyrrhura snethlageaePyrrhura 60391075
60391077 Pyrrhura snethlageaePyrrhura 60391077
60391079 Pyrrhura snethlageaePyrrhura 60391079
60391081 Pyrrhura snethlageaePyrrhura 60391081
60391083 Pyrrhura snethlageaePyrrhura 60391083
60391085 Pyrrhura snethlageaePyrrhura 60391085
60391047 Pyrrhura snethlageaePyrrhura 60391047
56277925 Triclaria malachitaceaTriclaria 56277925