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DNA Surveillance

Species identification with DNA
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General details for dataset 'Glo CytB Vs4.3'

Loci: Cytochrome B
Domain: Globicephalinae + Orcininae Vs4.3
Alignment: 35 sequences, 405 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -3.0/-1.0
Substitution model
-ACGT
A-1.02.01.0
C1.0-1.02.0
G2.01.0-1
T1.02.01-
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

Main sequences
IDNameGroup
Fatt001 pygmy killerFeresa attenuata
Fatt2.LD pygmy killerFeresa attenuata
Fatt836 pygmy killerFeresa attenuata
Ggri001 Risso'sGrampus griseus
Ggri003 Risso'sGrampus griseus
Ggri173 Risso'sGrampus griseus
Ggri3.DY Risso'sGrampus griseus
GgriA9.LD Risso'sGrampus griseus
GgriNZ01 Risso'sGrampus griseus
GgriP8.LD Risso'sGrampus griseus
GmacNZ14 short-finned pilotGlobicephala macrorhynchus
GmacA4.LD short-finned pilotGlobicephala macrorhynchus
GmacP5.LD short-finned pilotGlobicephala macrorhynchus
Gmel6.LD long-finned pilotGlobicephala melas
Gmel9.UA long-finned pilotGlobicephala melas
GmelNZ48 long-finned pilotGlobicephala melas
Obre7.UA IrrawaddyOrcaella brevirostris
ObreAu3.LD Irrawaddy (snubfin)Orcaella brevirostris
ObreWP2.LD IrrawaddyOrcaella brevirostris
Oorc8.UA killer whaleOrcinus orca
OorcA0.LD killer whaleOrcinus orca
OorcCol01 killer whaleOrcinus orca
OorcNZ97.1 killer whaleOrcinus orca
OorcP1.LD killer whaleOrcinus orca
OorcRS01 killer whaleOrcinus orca
Pcra002 false killerPseudorca crassidens
Pcra7.LD false killerPseudorca crassidens
PcraNZ1.MD false killerPseudorca crassidens
Pele001 melon-headedPeponocephala electra
Pele223 melon-headedPeponocephala electra
Pele3.LD melon-headedPeponocephala electra
Pele848 melon-headedPeponocephala electra
PeleFP01 melon-headedPeponocephala electra
Outgroup sequences
IDNameGroup
Lacu5.LD Atlantic white-sidedLagenorhynchus acutus
LobsNZ06 duskyLagenorhynchus obscurus