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DNA Surveillance

Species identification with DNA
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General details for dataset 'Myst CytB Vs4.3'

Loci: Cytochrome B
Domain: Mysticetes Vs4.3
Alignment: 43 sequences, 405 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -3.0/-1.0
Substitution model
-ACGT
A-1.02.01.0
C1.0-1.02.0
G2.01.0-1
T1.02.01-
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

Main sequences
IDNameGroup
BacuNA3.UA dwarf minkeBalaenoptera acutorostrata acutorostrata
BacuNA3.UA North Atlantic minkeBalaenoptera acutorostrata acutorostrata
BacuZ14337 North pacific minkeBalaenoptera acutorostrata acutorostrata
BacuZ2156 North pacific minkeBalaenoptera acutorostrata acutorostrata
BacuZ2313 North pacific minkeBalaenoptera acutorostrata acutorostrata
BbonNZ06 Antarctic minkeBalaenoptera bonaerensis
BbonNZ08 Antarctic minkeBalaenoptera bonaerensis
BbonSA1 Antarctic minkeBalaenoptera bonaerensis
BbonSO1.UA Antarctic minkeBalaenoptera bonaerensis
Bbor2.UA seiBalaenoptera borealis
BborNZ02 seiBalaenoptera borealis
BedeJ0.HY Bryde's (Kochi )Balaenoptera edeni (Kochi form)
BedeNP1.HY Bryde's (common )Balaenoptera edeni (Kochi form)
BedeNZ15 Bryde's (common )Balaenoptera edeni (Kochi form)
BedeWP2.HY Bryde's (Solomon Is. )Balaenoptera edeni (Kochi form)
BmubNC.CG blue (pygmy?)Balaenoptera musculus
Bmus1.UA blueBalaenoptera musculus
Bmus4.UA blueBalaenoptera musculus
BmysAR5.MM bowheadBalaena mysticetus
BmysAR8.UA bowheadBalaena mysticetus
Bphy1.UA finBalaenoptera physalus
Bphy5.UA finBalaenoptera physalus
Bphy6.MM finBalaenoptera physalus
Cmar6.UA pygmy rightCaperea marginata
CmarSI21 pygmy rightCaperea marginata
Eaus123 southern rightEubalaena australis
Eaus604 southern rightEubalaena australis
EglaNA7.UA southern rightEubalaena australis
EglaZ13086 North Atlantic rightEubalaena glacialis
EglaZ28310 North Atlantic rightEubalaena glacialis
EglaZ28311 North Atlantic rightEubalaena glacialis
Ejap1.TS North Pacific rightEubalaena japonica
Ejap2.TS North Pacific rightEubalaena japonica
EjapZ13189 North Pacific rightEubalaena japonica
EjapZ13190 North Pacific rightEubalaena japonica
Erob.TS grayEschrichtius robustus
Erob1.UA grayEschrichtius robustus
Erob2.UA grayEschrichtius robustus
ErobNP1.MM grayEschrichtius robustus
ErobNP5.UA grayEschrichtius robustus
Mnov0.MM humpbackMegaptera novaeangliae
Mnov4.UA humpbackMegaptera novaeangliae
Outgroup sequences
IDNameGroup
Pmac9.UA spermPhyseter macrocephalus