title logo

DNA Surveillance

Species identification with DNA

Witness for Whales Home About How to Use The Science Links and Publications Data Ownership
Search Cluster (Simple) Cluster (Advanced) Maximum Likelihood Example Data

General details for dataset 'Myst Ctrl Vs4.3'

Loci: mtDNA control Region (=D-Loop)
Domain: Mysticetes Vs4.3
Alignment: 64 sequences, 386 sites
Alignment scoring
Create/extend = -3.0/-1.0
Substitution model
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

Main sequences
Bac07dw dwarf minkeBalaenoptera acutorostrata subsp. (dwarf)
BacNZ03dw dwarf minkeBalaenoptera acutorostrata subsp. (dwarf)
BacuNA3.IB North Atlantic minkeBalaenoptera acutorostrata acutorostrata
BacuNA6.UA North Atlantic minkeBalaenoptera acutorostrata acutorostrata
BacuZ14337 North Pacific minkeBalaenoptera acutorostrata scammoni
BacuZ2156 North Pacific minkeBalaenoptera acutorostrata scammoni
BacuZ2313 North Pacific minkeBalaenoptera acutorostrata scammoni
BacuZ7446 North Atlantic minkeBalaenoptera acutorostrata acutorostrata
Bbon06 Antarctic minkeBalaenoptera bonaerensis
Bbon08 Antarctic minkeBalaenoptera bonaerensis
BbonQL.SB Antarctic minkeBalaenoptera bonaerensis
BbonSO8.RH Antarctic minkeBalaenoptera bonaerensis
BborNA5.UA seiBalaenoptera borealis
BborNZ1.SB seiBalaenoptera borealis
BborWNA.SB seiBalaenoptera borealis
BedeI10.HY Bryde's (common )Balaenoptera edeni (Common form)
BedeJG1.HY Bryde's (Kochi )Balaenoptera edeni (Kochi form)
BedeJG2.HY Bryde's (Kochi )Balaenoptera edeni (Kochi form)
BedeJP1.HY Bryde's (Kochi )Balaenoptera edeni (Kochi form)
BedeNP1.HY Bryde's (common )Balaenoptera edeni (Common form)
BedeNP8.HY Bryde's (common )Balaenoptera edeni (Common form)
BedeNRIFSF1 Bryde's (omurai)Balaenoptera edeni (Omurai form)
BedeNSMT-M32505 Bryde's (omurai)Balaenoptera edeni (Omurai form)
BmubNC.CG blue (pygmy)Balaenoptera musculus
BmubNZ2.SB blue (pygmy)Balaenoptera musculus
BmusIC4.UA blueBalaenoptera musculus
BmusMX.SB blueBalaenoptera musculus
BmysA bowheadBalaena mysticetus
BmysB bowheadBalaena mysticetus
BmysC bowheadBalaena mysticetus
BmysNEPSB1 bowheadBalaena mysticetus
BmysNEPSB2 bowheadBalaena mysticetus
BmysNP7.UA bowheadBalaena mysticetus
BphyIC5.UA finBalaenoptera physalus
BphyMD.CB finBalaenoptera physalus
CmarNZ1.SB pygmy rightCaperea marginata
CmarSA8.UA pygmy rightCaperea marginata
EauNZ0301 southern rightEubalaena australis
EauNZ0305 southern rightEubalaena australis
EauNZ0308 southern rightEubalaena australis
EauNZ0310 southern rightEubalaena australis
EausSO8.HR southern rightEubalaena australis
EausSP16NP southern rightEubalaena australis
EglaNA0.SM North Atlantic rightEubalaena glacialis
EglaNA1.SM North Atlantic rightEubalaena glacialis
EglaNA2.SM North Atlantic rightEubalaena glacialis
EglaNA3.SM North Atlantic rightEubalaena glacialis
EglaNA9.SM North Atlantic rightEubalaena glacialis
Ejap1.TS North Pacific rightEubalaena japonica
Ejap2.TS North Pacific rightEubalaena japonica
EjapNP1.HR North Pacific rightEubalaena japonica
EjapNP2.HR North Pacific rightEubalaena japonica
EjaZ7962 North Pacific rightEubalaena japonica
EjaZ7963 North Pacific rightEubalaena japonica
Erob.TS grayEschrichtius robustus
Erob1.UA grayEschrichtius robustus
Erob2.UA grayEschrichtius robustus
ErobNP0.UA grayEschrichtius robustus
ErobWA397 grayEschrichtius robustus
ErobWS03 grayEschrichtius robustus
MnovIC8.UA humpbackMegaptera novaeangliae
MnovSEA9 humpbackMegaptera novaeangliae
Outgroup sequences
PmacEP4.DW spermPhyseter macrocephalus
PmaIC3.UA spermPhyseter macrocephalus