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DNA Surveillance

Species identification with DNA

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General details for dataset 'Odont Ctrl Vs3.1'

Loci: mtDNA control Region (=D-Loop)
Domain: Odontocetes Vs3.1
Alignment: 69 sequences, 431 sites
Alignment scoring
Create/extend = -3.0/-1.0
Substitution model
(A,G,C,T) = (0.30751, 0.22645, 0.13893, 0.32711)

Sequence details

CeutC6.FP Chilean DolphinCephalorhynchus
CeutH1.FP Chilean DolphinCephalorhynchus
CheavMH.FP Heaviside's DolphinCephalorhynchus
CheavMA.FP Heaviside's DolphinCephalorhynchus
CcomD9.FP Commerson's DolphinCephalorhynchus
CcomL2.FP Commerson's DolphinCephalorhynchus
CheBP03D Hector's DolphinCephalorhynchus
CheWC16J Hector's DolphinCephalorhynchus
LausMG2.FP Peale's DolphinLagenorhynchus
LperNZ4.FP Southern Right Whale DolphinLissodelphis
LperNZFC Southern Right Whale DolphinLissodelphis
LacuNF7.FC Atlantic White-Sided DolphinLagenorhynchus
LacuNF6.FC Atlantic White-Sided DolphinLagenorhynchus
LalbNA5.FC White-Beaked DolphinLagenorhynchus
LoblNP8.FC Pacific White-Sided DolphinLagenorhynchus
LoblNP1.FC Pacific White-Sided DolphinLagenorhynchus
LobsPE2.FC Dusky DolphinLagenorhynchus
LobsNZW1AH Dusky DolphinLagenorhynchus
LcruMG2.FP Hourglass DolphinLagenorhynchus
DcapCA1.PR Common Dolphin (Long-Beaked)Delphinus
DcapCA4.PR Common Dolphin (Long-Beaked)Delphinus
DdelCA7.PR Common Dolphin (Short-Beaked)Delphinus
DdelCA6.PR Common Dolphin (Short-Beaked)Globicephala
ScoeMD1.AV Striped DolphinStenella
SbreFP1.MP Rough-Toothed DolphinSteno
TaduA8.JW Bottlenose Dolphin (Aduncus form)Tursiops
TaduA1.JW Bottlenose Dolphin (Aduncus form)Tursiops
TtruT12.JW Bottlenose Dolphin (Truncatus form)Tursiops
TtruT2.JW Bottlenose Dolphin (Truncatus form)Tursiops
GgriNZ1.MD Risso's DolphinGrampus
GgriMD.AV Risso's DolphinGrampus
GmacAT1.LS Short-Finned Pilot WhaleGlobicephala
GmacCA2.LS Short-Finned Pilot WhaleGlobicephala
GmelNA8.LS Long-Finned Pilot WhaleGlobicephala
GmelNZ01MD Long-Finned Pilot WhaleGlobicephala
PcraNZ1.MD False Killer WhalePseudorca
PeleFP1.MP Melon-Headed WhalePeponocephala
OorcNP9.RH Killer WhaleOrcinus
OorcNZ1.MD killer whaleOrcinus
MmonAR6.PP narwhalMonodon
MmonAR5.PP NarwhalMonodon
DleuAR7.WL BelugaDelphinapterus
DleuAR9.JM BelugaDelphinapterus
AdioTF5.PR Spectacled PorpoiseAustralophocaena
PphoNP5.PR Harbour PorpoisePhocoena
PphoNP0.PR Harbour PorpoisePhocoena
PspiPE4.PR Burmeister's PorpoisePhocoena
PspiPE7.PR Burmeister's PorpoisePhocoena
PsinCA3.PR VaquitaPhocoena
PdalNP2.PR Dall's PorpoisePhocoenoides
PdalNP9.PR Dall's PorpoisePhocoenoides
NphoJPF.HY Finless PorpoiseNeophocaena
NphoJPB.HY Finless PorpoiseNeophocaena
IgeoAM2.BH Amazon River Dolphin (boto) subspecies geoffrensisInia
IgeohO1.BH Amazon River Dolphin (boto) subspecies humboldtianaInia
IgeobB5.BH Amazon River Doplhin (boto) subspecies bolivensisInia
PblaBRB.ES La Plata River Dolphin (franciscana)Pontoporia
PblaBRK.ES La Plata River Dolphin (franciscana)Pontoporia
MgrNZ05.MD Gray's Beaked WhaleMesoplodon
ZcaNZ11.MD Cuvier's Beaked WhaleAustralophocaena
LvexA7.SL Yangtzee River Dolphin (baiji)Lipotes
LvexC8.SL Yangtzee River Dolphin (baiji)Lipotes
LvexB0.SL Yangtzee River Doplhin (baiji)Lipotes
LvexD9.SL Yangtzee River Dolphin (baiji)Lipotes
KsiTASPWW2 Dwarf Sperm WhaleKogia
KbreNZ38SP Pygmy Sperm WhaleKogia
KbreNZ01SP Pygmy Sperm WhaleKogia
PmaIC3.UA Sperm WhalePhyseter
PmacEP4.DW Sperm WhalePhyseter